Phyllostomidae

Aim To test the hypothesis that Caribbean Short‐faced bats descended from a single recent ancestor that originated in the continental Neotropics (Mexico, Central America and/or South America). Location The Neotropics, including the West Indies. Methods New mitochondrial cytochrome b and nuclear Rag2 sequences were combined with published molecular data to estimate phylogenetic relationships and sequence divergence among Short‐faced bats. The resulting phylogenies were compared with those compatible with the single‐origin hypothesis using two model‐based statistical tests. Confidence limits on sequence divergence were estimated using a parametric bootstrap. Results All molecular phylogenies revealed two independent Caribbean lineages and showed that continental Short‐faced bats share a recent common ancestor. Morphology‐based trees compatible with the single‐origin hypothesis were significantly worse at explaining the molecular data than any molecular phylogeny. Main conclusions The ancestor of all Short‐faced bats reached the Antilles in the Miocene, too recently to have used a proposed Oligocene land bridge, and well before the Pleistocene glaciations that are thought to have facilitated dispersal for many bats. After a long period of isolation, Short‐faced bats diversified quickly on the Caribbean islands. A single Short‐faced lineage then reached the continent and subsequently expanded its range and diversified into the four extant genera. Among bats, independent lineages of aerial insectivores and nectarivores have also recolonized the continent after evolving in the West Indies. The evidence for an insular origin of the short‐faced frugivorous radiation completes a dynamic model of Caribbean biogeography that encompasses an entire biological community.

The traditional explanation of the distribution of the Mormoopidae is that this family originated in southern Central America or northern South America, later expanding its range north to Mexico and the West Indies, and differentiating into eight species. An alternative fossil-based hypothesis argues that the family originated in the northern Neotropics, reached the Caribbean early in its history, and dispersed to South America after the completion of the Isthmus of Panama. The present study analyses new and previously published sequence data from the mitochondrial 12S, tRNAval, 16S, and cytochrome b, and the nuclear Rag2, to evaluate species boundaries and infer relationships among extant taxa. Fixed differences in cytochrome b often coincide with published morphological characters and show that the family contains at least 13 species. Two additional, morphologically indistinct, lineages are restricted to Suriname and French Guiana. Phylogeny-based inferences of ancestral area are equivocal on the geographical origin of mormoopids, in part because several internal nodes are not resolved with the available data. Divergences between Middle American and Antillean populations are greater than those between Mexico/Central America and South America. This suggests that mormoopids diversified in northern Neotropics before entering South America. A northern neotropical origin for mormoopids is congruent with both the Tertiary fossil record and recent phylogenetic hypotheses for the sister family to the Mormoopidae, the Phyllostomidae.

We explore population genetic structure in phyllostomid bats (Ardops nichollsi, Brachyphylla cavernarum and Artibeus jamaicensis) from the northern Lesser Antilles by investigating the degree to which island populations are genetically differentiated. Our hypothesis, that the island populations are genetically distinct because of a combination of founding events, limited migration and genetic drift exacerbated by catastrophe‐induced fluctuations in population size, is derived from a priori hypotheses erected in the literature. The first prediction of this hypothesis, that within each species island populations are monophyletic, was tested using a parametric bootstrap approach. Island monophyly could not be rejected in Ardops nichollsi (P = 0.718), but could be rejected in B. cavernarum (P < 0.001) and Artibeus jamaicensis (P < 0.001). A second prediction, that molecular variance is partitioned among islands, was tested using an amova and was rejected in each species [Ardops nichollsi (P = 0.697); B. cavernarum (P = 0.598); Artibeus jamaicensis (P = 0.763)]. In B. cavernarum and Artibeus jamaicensis, the admixture in mitochondrial haplotypes from islands separated by > 100 km of ocean can be explained either by interisland migration or by incomplete lineage sorting of ancestral polymorphism in the source population. As an a posteriori test of lineage sorting, we used simulations of gene trees within a population tree to suggest that lineage sorting is an unlikely explanation for the observed pattern of nonmonophyly in Artibeus jamaicensis (PW < 0.01; PSE = 0.04), but cannot be rejected in B. cavernarum (PW = 0.81; PSE = 0.79). A conservative interpretation of the molecular data is that island populations of Artibeus jamaicensis, although isolated geographically, are not isolated genetically.

A combination of 1,140 base pairs of the mitochondrial cytochrome b gene of Platalina, Lionycteris, and several species of Lonchophylla (Chiroptera: Phyllostomidae) with 150 morphological, sex chromosome, and restriction site characters were used in an attempt to resolve relationships among the lonchophylline taxa. In addition, the monophyly of Lonchophylla was tested, particularly with respect to Platalina. The most parsimonious hypothesis of relationships using all available characters was (L. mordax ((L. chocoana (L. robusta, L. handleyi))(L. thomasi (Lionycteris, Platalina)))). Lonchophylla appears to be paraphyletic, but this arrangement is not well supported. Our analyses suggest that Platalina is not simply a large Lonchophylla, as had been suggested by previous morphological analyses. The low support values for basal relationships found in this study are probably caused by saturation in cytochrome b 3rd positions. Additionally, 2 alternative explanations are viable (if improbable): unsampled lonchophyllines are necessary to confidently resolve relationships at the base of the group, or the lack of resolution at the base of the lonchophylline phylogeny might be explained by rapid speciation following the separation from other glossophagines. Future work examining the phylogenetic relationships of lonchophylline bats should focus on describing new taxa, obtaining tissue samples from unsequenced representatives, and adding nuclear loci to this mitochondrial DNA data set.

Lonchophylla is a diverse genus of glossophagines characterized by large, forwardly projecting inner upper incisors and the absence of zygomatic arches. Seven species are currently recognized, including the large-bodied (greatest length of skull .24.5 mm) robusta, handleyi, hesperia, and bokermanni and the small-bodied (greatest length of skull, 24.5 mm) thomasi, dekeyseri, and mordax. Lonchophylla species range throughout the Neotropics and include endemics in Amazonia, the Cerrado, and the arid regions of coastal Peru and Ecuador. In this paper I describe a new large-bodied species, Lonchophylla chocoana, from the subtropical rainforests of the Choco ́ in southwestern Colombia and northwestern Ecuador. I also document the diagnostic external, craniodental, and mitochondrial characters of the new species and summarize morphological characteristics for the new species and its sympatric congeners.